Patchwork gnu: star: Update to 2.5.2b.

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Submitter Raoul J.P. Bonnal
Date Dec. 17, 2016, 8:25 a.m.
Message ID <CACQsWTMRbJW8usqf=7=Uutm_-mTA+HmEfRrnBbBk7=VfBapq+Q@mail.gmail.com>
Download mbox | patch
Permalink /patch/18536/
State New
Headers show

Comments

Raoul J.P. Bonnal - Dec. 17, 2016, 8:25 a.m.
---
 gnu/packages/bioinformatics.scm | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

               (uri (string-append "
https://github.com/alexdobin/STAR/archive/"
@@ -4932,7 +4932,7 @@ application of SortMeRNA is filtering rRNA from
metatranscriptomic data.")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "0xjlsm4p9flln111hv4xx7xy94c2nl53zvdvbk9winmiradjsdra"))
+                "1na6np880r1zaamiy00hy8bid5anpy0kgf63587v2yl080krk2zq"))
               (modules '((guix build utils)))
               (snippet
                '(begin
Ben Woodcroft - Dec. 17, 2016, 1:28 p.m.
Hi,

On 17/12/16 18:25, Ra wrote:
>
> ---
>  gnu/packages/bioinformatics.scm | 4 ++--
>  1 file changed, 2 insertions(+), 2 deletions(-)

Thanks for the patch. I pushed this as 
'c9e9154e993f055a438e2e43518bbd0740aaaf24' after modifying the commit 
message and removing the extra precompiled binary it is now bundled with.
ben
Ben Woodcroft - Dec. 18, 2016, 12:06 a.m.
On 17/12/16 23:28, Ben Woodcroft wrote:
> Hi,
>
> On 17/12/16 18:25, Ra wrote:
>>
>> ---
>>  gnu/packages/bioinformatics.scm | 4 ++--
>>  1 file changed, 2 insertions(+), 2 deletions(-)
>
> Thanks for the patch. I pushed this as 
> 'c9e9154e993f055a438e2e43518bbd0740aaaf24' after modifying the commit 
> message and removing the extra precompiled binary it is now bundled with.

I forgot about adding an attribution line for you. Fixed in 
3fffabce2a0e7013379d090a72199df703d5e66d.

Patch

diff --git a/gnu/packages/bioinformatics.scm
b/gnu/packages/bioinformatics.scm
index 3e9c82f..1b6532b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4924,7 +4924,7 @@  application of SortMeRNA is filtering rRNA from
metatranscriptomic data.")
 (define-public star
   (package
     (name "star")
-    (version "2.5.2a")
+    (version "2.5.2b")
     (source (origin
               (method url-fetch)