Patchwork [20/25] gnu: Add r-category.

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Submitter Ricardo Wurmus
Date Sept. 21, 2016, 8:45 p.m.
Message ID <20160921204541.3981-20-ricardo.wurmus@mdc-berlin.de>
Download mbox | patch
Permalink /patch/15873/
State New
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Ricardo Wurmus - Sept. 21, 2016, 8:45 p.m.
* gnu/packages/bioinformatics.scm (r-category): New variable.
---
 gnu/packages/bioinformatics.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

Patch

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 52fa17c..d99869e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5240,6 +5240,37 @@  the graph algorithms contained in the Boost library.")
 Enrichment Analysis} (GSEA).")
     (license license:artistic2.0)))
 
+(define-public r-category
+  (package
+    (name "r-category")
+    (version "2.38.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "Category" version))
+       (sha256
+        (base32
+         "0c8px9ar589f3iqkbk9vfhwj30dpnxj81h8sfq20cl1cbmcx2a04"))))
+    (properties `((upstream-name . "Category")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-annotate" ,r-annotate)
+       ("r-annotationdbi" ,r-annotationdbi)
+       ("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-genefilter" ,r-genefilter)
+       ("r-graph" ,r-graph)
+       ("r-gseabase" ,r-gseabase)
+       ("r-matrix" ,r-matrix)
+       ("r-rbgl" ,r-rbgl)
+       ("r-rsqlite" ,r-rsqlite)))
+    (home-page "http://bioconductor.org/packages/Category")
+    (synopsis "Category analysis")
+    (description
+     "This package provides a collection of tools for performing category
+analysis.")
+    (license license:artistic2.0)))
+
 (define-public vsearch
   (package
     (name "vsearch")