Patchwork [2/4] gnu: Add r-seqinr.

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Submitter Ricardo Wurmus
Date July 6, 2016, 3:31 p.m.
Message ID <20160706153118.3216-2-ricardo.wurmus@mdc-berlin.de>
Download mbox | patch
Permalink /patch/13676/
State New
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Ricardo Wurmus - July 6, 2016, 3:31 p.m.
* gnu/packages/bioinformatics.scm (r-seqinr): New variable.
---
 gnu/packages/bioinformatics.scm | 24 ++++++++++++++++++++++++
 1 file changed, 24 insertions(+)

Patch

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4cd90b9..294f4ee 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4386,6 +4386,30 @@  In addition, a few low-level concrete subclasses of general interest (e.g.
 S4Vectors package itself.")
     (license license:artistic2.0)))
 
+(define-public r-seqinr
+  (package
+    (name "r-seqinr")
+    (version "3.1-3")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (cran-uri "seqinr" version))
+        (sha256
+          (base32
+            "0bbjfwbqg74wsamb3iz01g0ssdpdpg65gh00y9xlnpk4wb990n4n"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-ade4" ,r-ade4)))
+    (inputs
+     `(("zlib" ,zlib)))
+    (home-page "http://seqinr.r-forge.r-project.org/")
+    (synopsis "Biological sequences retrieval and analysis")
+    (description
+     "This package provides tools for exploratory data analysis and data
+visualization of biological sequence (DNA and protein) data.  It also includes
+utilities for sequence data management under the ACNUC system.")
+    (license license:gpl2+)))
+
 (define-public r-iranges
   (package
     (name "r-iranges")